PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027344193.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 418aa MW: 46195.9 Da PI: 8.1127

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027344193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.2	3.6e-07	243	265	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F+r nL+ H+r H XP_027344193.1 243 HYCQVCGKGFKRDANLRMHMRAH 265 68*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MISRATSGFQ SVHQGIQMFP DPDDLVSPSM EINSASAGSH SSSLLFNLSV LKDKLSQVQT 60 LVGVILSPNQ SLPESTSMAI SSMNSTIQEI LVTATSMMFT CQQMALASNI PPGTTTTCTN 120 QLHSQDKLPN SNFCTNRSVL SNIGADIRGQ EGLFSSTESE ALDWFGESYN NNDNNNNNNN 180 NDNSFNCKIK EDDTGVAISE NNNSRGGLSP RDEPNEGYNR GISTKNSDIV ELDAADLLAK 240 YTHYCQVCGK GFKRDANLRM HMRAHGDEYK TNAALSNPIK NRGSLEGGRE CLMSMKPKKY 300 SCPQEGCRWN QKHAKFQPLK SMICAKNHYK RSHCPKMYVC KRCSQKQFSV LSDLRTHEKH 360 CGDLKWQCSC GTTFSRKDKL MGHVALFVGH QPAISNGLSY SGKVEQHTLQ MQIDGCSR

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MISRATSGFQ SVHQGIQMFP DPDDLVSPSM EINSASAGSH SSSLLFNLSV LKDKLSQVQT  60
LVGVILSPNQ SLPESTSMAI SSMNSTIQEI LVTATSMMFT CQQMALASNI PPGTTTTCTN  120
QLHSQDKLPN SNFCTNRSVL SNIGADIRGQ EGLFSSTESE ALDWFGESYN NNDNNNNNNN  180
NDNSFNCKIK EDDTGVAISE NNNSRGGLSP RDEPNEGYNR GISTKNSDIV ELDAADLLAK  240
YTHYCQVCGK GFKRDANLRM HMRAHGDEYK TNAALSNPIK NRGSLEGGRE CLMSMKPKKY  300
SCPQEGCRWN QKHAKFQPLK SMICAKNHYK RSHCPKMYVC KRCSQKQFSV LSDLRTHEKH  360
CGDLKWQCSC GTTFSRKDKL MGHVALFVGH QPAISNGLSY SGKVEQHTLQ MQIDGCSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-108	C2H2 family protein