PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027344270.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

DBB

Protein Properties

Length: 239aa MW: 26464.8 Da PI: 4.487

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027344270.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.4	2.5e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e H H++ XP_027344270.1 4 QCDVCEKAPATVICCADEAALCAKCDVEVHAAnklaskHQR 44 7*****************************65667777765 PP
2	zf-B_box	27.5	6.7e-09	55	94	4	37
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 +kC+ +++k + +fC +++ l+C+dC + +H+ H XP_027344270.1 55 PKCDICQDKAAFIFCVEDRALFCQDCDEPIHSAgslsanH 94 79*****************************656666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MKIQCDVCEK APATVICCAD EAALCAKCDV EVHAANKLAS KHQRLLLQCL SNKFPKCDIC 60 QDKAAFIFCV EDRALFCQDC DEPIHSAGSL SANHQRFLAT GIQVALNSTC TRDNEKSQLE 120 PPNRNAQVST KVPSQQVPSF TSSWAVDDLL ELTGFESPEK KEPLQFGELE WLPDVGLFSE 180 QFTPEALSAA EVPQLPVTHN SSNIASYRTS KSYISYKKPR IEVLNDDDDD EYFTVPDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	1e-101	DBB family protein