PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027344758.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 750aa    MW: 83529.8 Da    PI: 6.5563
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027344758.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.12.3e-2195150156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rrk +++t+eq++e+e+lF+++++p++++r++L+k+lgL  rqVk+WFqNrR++ k
  XP_027344758.1  95 RRKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIK 150
                     7999************************************************9877 PP
2START2213.9e-692684894206
                     HHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEE CS
           START   4 eeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlev 84 
                     ++a++elvk+a  +ep+W +s+    e++n+de++++f+ +++        +ea+r++gvv+ +l +lv+++ld++ qW+e+++    ka+t++v
  XP_027344758.1 268 NQATEELVKMANMGEPLWLRSVetgrEILNYDEYVKQFAVENScserpkTFIEASREVGVVFVDLSRLVQSFLDVN-QWKEMFPclisKAATVDV 361
                     67899*********************************998889****99**************************.****************** PP

                     ECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE- CS
           START  85 issg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdl 172
                     i+ g      ga+qlm+aelq+l+p+vp R+++fvR+++ql+a++w+ivdvS+d  +++  ++s+v+++++pSg++ie+ksngh+kv+wveh ++
  XP_027344758.1 362 ICRGegsnrnGAVQLMFAELQMLTPMVPsREVYFVRCCKQLSAEQWAIVDVSIDKVEDNI-DASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLEC 455
                     **********************************************************98.9********************************* PP

                     -SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 173 kgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++ ++h ++r +v+sgla+ga++w atlq qce+
  XP_027344758.1 456 QKITVHTMYRAIVNSGLAFGARHWIATLQLQCER 489
                     ********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 750 aa     Download sequence    
MGVDMSNNKP PHTKDLFSSP ALSLSLAGIF RHGAEAPETS SMEVVGDEVR REDTVEISSD  60
NSGPVRSRSD EDFDGEGGHE HDDDDGDADK NPKKRRKYHR HTAEQIREME ALFKESPHPD  120
EKQRQQLSKQ LGLAPRQVKF WFQNRRTQIK AIQERHENSL LKTELEKLRE ENKAMRETIN  180
KSCCPNCGMG TASLDGFMSS TEEKQLRFEN AKLKAEVEKL RAVVGKSSPG TTSPSCSAGH  240
NEEENRNSLC FYKGIFGLEK SRIMDIVNQA TEELVKMANM GEPLWLRSVE TGREILNYDE  300
YVKQFAVENS CSERPKTFIE ASREVGVVFV DLSRLVQSFL DVNQWKEMFP CLISKAATVD  360
VICRGEGSNR NGAVQLMFAE LQMLTPMVPS REVYFVRCCK QLSAEQWAIV DVSIDKVEDN  420
IDASLVKCRK RPSGCIIEDK SNGHCKVIWV EHLECQKITV HTMYRAIVNS GLAFGARHWI  480
ATLQLQCERL VFYMATNVPM KDSTGVATLA GRKSILKLAQ RMACSFCHAV GASSFHTWTK  540
VTSKTGEDIR ISSRKNLNDP GEPLGVILSA VSSIWLPVSP NVLFDFLRDE ARRSEWDIMA  600
SGASVQSIAN LAKGKDRGNF VNIHKIQSKE NSTWILQDSC TSAYESMVVY APVDLAGIQS  660
VLTGCDSSNL AVLPSGFSIL PDGLGARPFV ITSRQEEKHT EGGSLFTMTF QILANASPTA  720
KLTLESVESV NNLVSCTLRN IRTSLQCEDG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19397KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein