PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027344774.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family AP2
Protein Properties Length: 341aa    MW: 38693.7 Da    PI: 7.3416
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027344774.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2513.7e-163695155
             AP2  1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55
                    s y+GV++++++gr++A+++d  ++n    k+ ++++lg ++ +e Aa+a++ a++k++g
  XP_027344774.1 36 SIYRGVTRHRWTGRYEAHLWDkNCWNEsqsKKgRQVYLGAYDDEEAAARAYDLAALKYWG 95
                    57*******************999977777557*************************98 PP
2AP251.32.8e-16138189155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ +++g
  XP_027344774.1 138 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 189
                     89****99**********99966...3.6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MAKKSQKSLK NTTTTNNTTK RTRKTVPRDS PPQRSSIYRG VTRHRWTGRY EAHLWDKNCW  60
NESQSKKGRQ VYLGAYDDEE AAARAYDLAA LKYWGQDTIL NFPLSNYEEK LKEMEGQSKE  120
EYIGSLRRKS SGFSRGVSKY RGVARHHHNG RWEARIGRVF GNKYLYLGTY ATQEEAATAY  180
DMAAIEYRGL NAVTNFDLSR YINWLRPKTQ ENHENPSNED LHSNPELELG FVSHKLDSTS  240
GENEITQEGE IRSGGGASTT SSALGLLLQS SKFKEMIEKT SSASDYPPPP PESNPPRRTF  300
PEDIQTIFES QGSGIYTEND DIIFGDLSSF AAPIFHYELD A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.11e-103AP2 family protein