PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027344897.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 247aa    MW: 27760 Da    PI: 8.9589
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027344897.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.0001985107123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_027344897.1  85 FSCNYCQRKFYSSQALGGHQNAH 107
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MDLQRPEPCP KPSMDIQTER RQTEKEDQKH QHDSVPHLLL DLSLSNKDSG DASKPELNLL  60
NCFHTNLSEN SSESSHGNEM DPRVFSCNYC QRKFYSSQAL GGHQNAHKRE RTLARRGYKT  120
GASVSVDFGQ RNTTMASLSS HGLYNKSLGI QVHSMINKPS YQTPFFGLCR SHGQNGWQRQ  180
PLDSQPAIGN FHVGPETESS MADTVPRLSK FSTRVVTEGF GGYWLGSITH LKSKQEKLQK  240
LDLSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25160.12e-34C2H2 family protein