PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027345016.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family LSD
Protein Properties Length: 137aa    MW: 14483.9 Da    PI: 7.2555
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027345016.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD141.42.3e-132953125
         zf-LSD1  1 CggCrtlLsYPrGApsVRCalCdtV 25
                    C+gCr+lL YP GA+sV+Ca+C++V
  XP_027345016.1 29 CSGCRNLLVYPVGATSVCCAVCNAV 53
                    ************************9 PP
2zf-LSD146.94.4e-156892125
         zf-LSD1  1 CggCrtlLsYPrGApsVRCalCdtV 25
                    CggC+tlL+Y rGA+sV+C++C+tV
  XP_027345016.1 68 CGGCHTLLMYIRGATSVQCSCCHTV 92
                    ************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MPVPLAPYPT PPAPYTPPAA NGAQSQLVCS GCRNLLVYPV GATSVCCAVC NAVTAVPPPG  60
TEMAQLVCGG CHTLLMYIRG ATSVQCSCCH TVNLALEGGT CQLWELQDAT HVPIWSKIRE  120
MCSLQFCNIG WGLSKHH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32540.33e-34LSD family protein