PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027345433.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 236aa    MW: 27493.5 Da    PI: 9.0656
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027345433.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF97.94.3e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+ey++
  XP_027345433.1  9 KRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYAT 59
                    79***********************************************86 PP
2K-box1081e-35751741100
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     y++++ ++++++ + +++ e+++Lk++i+ Lqr++Rh++GedL+s++lkeLq+LeqqL+++lk+iR+++n+l++e+i+elqkkek +qe+n++L 
  XP_027345433.1  75 YAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNHRHYMGEDLGSMNLKELQSLEQQLDTALKQIRTRRNQLMYESISELQKKEKLIQEQNNMLA 169
                     566777888889999******************************************************************************** PP

           K-box  96 kklee 100
                     kk++e
  XP_027345433.1 170 KKIKE 174
                     **987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRAGLLK KAHEISVLCD AEVALIVFSH KGKLFEYATD  60
SCMEKILERY ERYAYAERQL VANDSESQGN WTIEYTRLKA KIDLLQRNHR HYMGEDLGSM  120
NLKELQSLEQ QLDTALKQIR TRRNQLMYES ISELQKKEKL IQEQNNMLAK KIKEKEKVAA  180
QQAQWEHPNH GVNASFLLAQ PLLNMGGNYR EEAPEIGRNE LDLTLEPLYS CHLGCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.11e-113MIKC_MADS family protein