PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027345542.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 241aa    MW: 27632.1 Da    PI: 10.2278
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027345542.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.31.5e-312574150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+
  XP_027345542.1 25 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 74
                    79***********************************************8 PP
2K-box110.42e-36911892100
           K-box   2 qkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                     ++s+gks++ea+a+ +qqe+akL+ +i+nLq+ +R+++Ge L++++ k+L++Le++Lek++++iRskKnell+++ie++qk+e +lq++n+ Lr+
  XP_027345542.1  91 DSSNGKSASEANAQFYQQEAAKLRVQISNLQNHNRQMMGETLSNINAKDLKNLETKLEKGISRIRSKKNELLFAEIEYMQKREIDLQNNNQLLRA 185
                     5678888**************************************************************************************** PP

           K-box  97 klee 100
                     k++e
  XP_027345542.1 186 KIAE 189
                     *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MAFPNQSMSS VSPQRRMGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA  60
LIVFSSRGRL YEYANNSVKA SIERYKKASS DSSNGKSASE ANAQFYQQEA AKLRVQISNL  120
QNHNRQMMGE TLSNINAKDL KNLETKLEKG ISRIRSKKNE LLFAEIEYMQ KREIDLQNNN  180
QLLRAKIAES ERSHHNDNVL PGGTNYESMQ SQFDSRGYFQ VTGLQPNNHY ARQDHTSLQF  240
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18960.11e-113MIKC_MADS family protein