PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027345898.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 524aa MW: 58246.1 Da PI: 8.5345

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027345898.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.2e-05	72	94	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_027345898.1 72 FICEICNKGFQRDQNLQLHRRGH 94 89*******************88 PP
2	zf-C2H2	11.1	0.0012	149	171	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_027345898.1 149 WKCDKCSKKYAVQSDWKAHSKIC 171 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MMSEEAFSVA PNTIRGSLVH VQEDPNSNSN SNPNPNPNSN LARKKRNLPG TPDPDAEVVA 60 LSPKSLMATN RFICEICNKG FQRDQNLQLH RRGHNLPWKL RQRTNKDQVK KKVYVCPEKS 120 CVHHDPSRAL GDLTGIKKHY SRKHGEKKWK CDKCSKKYAV QSDWKAHSKI CGTREYKCDC 180 GTLFSRKDSF ITHRAFCDAL AEESARITTV PAALSNFRSD HHLTNAQASR VPQIFPGFHS 240 EYGGSGSEPL GNYVDSDQGQ QKLSLPLWLD QANSQLHPFN FPSKSSAFTS GANSASTVPD 300 LVQTMDMFGS QWVNYRYPET SFTNANLCVL PPHGLKQEQE ENKGDLSHST SSLYLSNHNP 360 THMSATALLQ KAVQMGSPRI NDHMFGLVGS NRNNNDNISH IVELRKLNEF VNGEGNTNTN 420 TNLGGGYLLN DSNNSFVVLT NTKVLNHPVM PVDEETTPSI VGKQLRSISS NNKNIQLGLT 480 RDFLGVGDDE SIRRPFLQQD LVEFNAMGSG SAMNLQSQYG GHYC

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MMSEEAFSVA PNTIRGSLVH VQEDPNSNSN SNPNPNPNSN LARKKRNLPG TPDPDAEVVA  60
LSPKSLMATN RFICEICNKG FQRDQNLQLH RRGHNLPWKL RQRTNKDQVK KKVYVCPEKS  120
CVHHDPSRAL GDLTGIKKHY SRKHGEKKWK CDKCSKKYAV QSDWKAHSKI CGTREYKCDC  180
GTLFSRKDSF ITHRAFCDAL AEESARITTV PAALSNFRSD HHLTNAQASR VPQIFPGFHS  240
EYGGSGSEPL GNYVDSDQGQ QKLSLPLWLD QANSQLHPFN FPSKSSAFTS GANSASTVPD  300
LVQTMDMFGS QWVNYRYPET SFTNANLCVL PPHGLKQEQE ENKGDLSHST SSLYLSNHNP  360
THMSATALLQ KAVQMGSPRI NDHMFGLVGS NRNNNDNISH IVELRKLNEF VNGEGNTNTN  420
TNLGGGYLLN DSNNSFVVLT NTKVLNHPVM PVDEETTPSI VGKQLRSISS NNKNIQLGLT  480
RDFLGVGDDE SIRRPFLQQD LVEFNAMGSG SAMNLQSQYG GHYC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	1e-104	C2H2 family protein