PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027345955.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 719aa MW: 79614 Da PI: 4.6721

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027345955.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.6	0.00052	529	566	13	55
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R++i +++eeLr ++P+ +K s L ++++Y+ Lq XP_027345955.1 529 RQQIQDRIEELRGIIPNG-----GKCSIDHLLDRTIRYMLFLQ 566 89**************98.....79999999999999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 719 aa Download sequence
MAMTEPQWNT LTTLCSENGW SYVIFWRIHP QNSLLLSVEN VYYGDQLGEE IVNTLPKVHL 60 MGEGFVGQAA LTGKHRWVHS DAPTEELSVT GLHIFEDDSC LYQQFSSGIK TVAVISVKPC 120 RVVQCGSKEK ILERLEFVEK TQRLLMGIQD DEEKLYGWSL KYVDGDNSKM FLGMTYSSAS 180 LDDSSPIMDK NLKEGMIPIH GYSSHLGDQQ TSTIAAHILS SDKDNTNSSI TNLIAKNPSF 240 GTWSGEVSSL ESLGKQLVSE IRTQDVEDVH GKMENAFSCD KLAVQDSELT SLYSMHGLLG 300 TFQDQIGNSP GIQHSAQSSI VTDSLSMVHE LSKDLQPVDM LEELFKFFSM DDLCQLLAPS 360 PEHSIYGTVT ALDKSLELNP TSFGVVSSSG ALDDEVPVTC QAPHSSLITA ANLDGQETST 420 FMHSSGNSAL DSMGIDLSCD QAEDWWGSMS TAATDTAFSD CIGGSRKRLF SELGIEELLN 480 GSNFEDQLST NRKRVVPAHE QPQKSVEHNK VTRKRARPGE TTRPRPKDRQ QIQDRIEELR 540 GIIPNGGKCS IDHLLDRTIR YMLFLQSITK YADKLYEPNE PKLIEPKNEE VLKDSSMGGR 600 KKCDGGITWA FEVGGQTMVC PIIVEDMGPP GQMLIEMLWE EQGSLLEMVD IIGGFGLNIL 660 KGKMEIREKK IWARFIVETP RVDSANKHCN ISDAGFSSMS NYGKTDMPLL PIVMTETLG

Sequence ? help Back to Top

Protein Sequence Length: 719 aa Download sequence

MAMTEPQWNT LTTLCSENGW SYVIFWRIHP QNSLLLSVEN VYYGDQLGEE IVNTLPKVHL  60
MGEGFVGQAA LTGKHRWVHS DAPTEELSVT GLHIFEDDSC LYQQFSSGIK TVAVISVKPC  120
RVVQCGSKEK ILERLEFVEK TQRLLMGIQD DEEKLYGWSL KYVDGDNSKM FLGMTYSSAS  180
LDDSSPIMDK NLKEGMIPIH GYSSHLGDQQ TSTIAAHILS SDKDNTNSSI TNLIAKNPSF  240
GTWSGEVSSL ESLGKQLVSE IRTQDVEDVH GKMENAFSCD KLAVQDSELT SLYSMHGLLG  300
TFQDQIGNSP GIQHSAQSSI VTDSLSMVHE LSKDLQPVDM LEELFKFFSM DDLCQLLAPS  360
PEHSIYGTVT ALDKSLELNP TSFGVVSSSG ALDDEVPVTC QAPHSSLITA ANLDGQETST  420
FMHSSGNSAL DSMGIDLSCD QAEDWWGSMS TAATDTAFSD CIGGSRKRLF SELGIEELLN  480
GSNFEDQLST NRKRVVPAHE QPQKSVEHNK VTRKRARPGE TTRPRPKDRQ QIQDRIEELR  540
GIIPNGGKCS IDHLLDRTIR YMLFLQSITK YADKLYEPNE PKLIEPKNEE VLKDSSMGGR  600
KKCDGGITWA FEVGGQTMVC PIIVEDMGPP GQMLIEMLWE EQGSLLEMVD IIGGFGLNIL  660
KGKMEIREKK IWARFIVETP RVDSANKHCN ISDAGFSSMS NYGKTDMPLL PIVMTETLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	4e-42	bHLH family protein