PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027346218.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

YABBY

Protein Properties

Length: 182aa MW: 20421.3 Da PI: 8.6048

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027346218.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	212.1	1.8e-65	6	159	5	170
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 ++e+vCyv+CnfCntilavsvP++sl+++vtvrCGhC++llsvn+ + + + ++ ++++++l +ee + k+ ++++++ +++ XP_027346218.1 6 MATERVCYVHCNFCNTILAVSVPYSSLLTIVTVRCGHCANLLSVNMGASLPTFPPQDP------QSQKQHLSFEEPSSKELGSSSKCN--KIAP- 91 579*****************************************999998888885......334455555555555544444433..3333. PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 e ++e pr+pp irP ekr rvPsaynrfikeeiqrikasnPdishreafs aaknWahfP+ihfgl XP_027346218.1 92 --FEAVEHEQPRIPP-IRPTEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSSAAKNWAHFPHIHFGL 159 ..2456778899999.9**************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 182 aa Download sequence
MSMDLMATER VCYVHCNFCN TILAVSVPYS SLLTIVTVRC GHCANLLSVN MGASLPTFPP 60 QDPQSQKQHL SFEEPSSKEL GSSSKCNKIA PFEAVEHEQP RIPPIRPTEK RHRVPSAYNR 120 FIKEEIQRIK ASNPDISHRE AFSSAAKNWA HFPHIHFGLK LDGNKQAKLD QGEGTEKSKG 180 FY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	5e-82	YABBY family protein