PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027346303.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 492aa MW: 54788.4 Da PI: 6.7439

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027346303.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.1	8.1e-07	246	267	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H XP_027346303.1 246 FCTICGKGFKRDANLRMHMRGH 267 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MDSNGSICAN TWTRSSSLTS PANDYGISAE APYKNFNQLS QTQSQLPCNS NNETKIPGQE 60 NFPLSESSQI GKLQDWDPSV MLNNLSFLEE KIHQLQGLVH LIVNQKGIGQ PNELVTQEQQ 120 LITTDLTSII VQLISTAGSL LPSVRHTLIN TSPLVGQLGQ LRGTIVPSRL GPSSSCIQPQ 180 NNSEKKISDQ SMQSDLPNNC EMEQNYNIED HELKDEDADD GENLPPGSYE ILQLEKEEIL 240 APHTHFCTIC GKGFKRDANL RMHMRGHGDE YKTPAALAKP HKESGSQPKL IKRYSCPYPG 300 CKRNKDHKKF QPLKTILCVK NHYKRTHCDK SYTCSRCNTK KFSVMADLKT HEKHCGKDKW 360 LCSCGTTFSR KDKLFGHIAL FQGHTPAIPL DDTKGIAEPP NHDGKENNTK VGSINFSFGS 420 NNPNGDRVQN VMNLKGNIDD PINYFPTLNF EANFGGFNEF TRPLFDDSEG SFSFMMPGSF 480 KSEGESTSDN LL

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MDSNGSICAN TWTRSSSLTS PANDYGISAE APYKNFNQLS QTQSQLPCNS NNETKIPGQE  60
NFPLSESSQI GKLQDWDPSV MLNNLSFLEE KIHQLQGLVH LIVNQKGIGQ PNELVTQEQQ  120
LITTDLTSII VQLISTAGSL LPSVRHTLIN TSPLVGQLGQ LRGTIVPSRL GPSSSCIQPQ  180
NNSEKKISDQ SMQSDLPNNC EMEQNYNIED HELKDEDADD GENLPPGSYE ILQLEKEEIL  240
APHTHFCTIC GKGFKRDANL RMHMRGHGDE YKTPAALAKP HKESGSQPKL IKRYSCPYPG  300
CKRNKDHKKF QPLKTILCVK NHYKRTHCDK SYTCSRCNTK KFSVMADLKT HEKHCGKDKW  360
LCSCGTTFSR KDKLFGHIAL FQGHTPAIPL DDTKGIAEPP NHDGKENNTK VGSINFSFGS  420
NNPNGDRVQN VMNLKGNIDD PINYFPTLNF EANFGGFNEF TRPLFDDSEG SFSFMMPGSF  480
KSEGESTSDN LL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-170	C2H2 family protein