PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027346346.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 525aa MW: 54562.1 Da PI: 8.1822

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027346346.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.1	1.5e-05	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_027346346.1 61 FVCEICNKGFQRDQNLQLHRRGH 83 89*******************88 PP
2	zf-C2H2	11.2	0.0011	137	159	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +++ XP_027346346.1 137 WKCDKCSKKYAVQSDWKAHSKVC 159 58*****************9877 PP
3	zf-C2H2	11.6	0.00083	167	185	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr++++ +H + XP_027346346.1 167 DCGTVFSRRDSFITHRAFC 185 9**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 525 aa Download sequence
MPVDLDNAST ASGEASVSSS GNHTAPPKPT IKKKRNLPGM PDPEAEVIAL SPKTLLATNR 60 FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSSKEVKKR VYVCPEPTCV HHDPSRALGD 120 LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKVCG TREYKCDCGT VFSRRDSFIT 180 HRAFCDALAE ESARSHTVVK ANSESDSKVL TGDSSPPPPP PPAAVTASEA IATSTTAATA 240 ITAVTSTNTT QSNSVMSLQT QKLELQENPP QVIEEPPATT PLNGSCVSNS TTGSTSNGGA 300 ITSSSSVFAS LFASSTASGN LHSQTPAFSD LIRAMGRPDH PADISVPSSS EAISLCLSTN 360 NGSSFFGTGG QECRQYAPPP QPALSATALL QKAAQMGSAA TNASLLRGFG IVSSSSASAS 420 SGQQDSLQWG QQLVEPESAS VTAGLGLGLP CDGVSGLKEL MMGTPSMFGP KHTTLDFLGL 480 GMAAGGTAGG GLSALITSIG GGLDVTAAAS FGNGEFSGKD MGSSS

Sequence ? help Back to Top

Protein Sequence Length: 525 aa Download sequence

MPVDLDNAST ASGEASVSSS GNHTAPPKPT IKKKRNLPGM PDPEAEVIAL SPKTLLATNR  60
FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSSKEVKKR VYVCPEPTCV HHDPSRALGD  120
LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKVCG TREYKCDCGT VFSRRDSFIT  180
HRAFCDALAE ESARSHTVVK ANSESDSKVL TGDSSPPPPP PPAAVTASEA IATSTTAATA  240
ITAVTSTNTT QSNSVMSLQT QKLELQENPP QVIEEPPATT PLNGSCVSNS TTGSTSNGGA  300
ITSSSSVFAS LFASSTASGN LHSQTPAFSD LIRAMGRPDH PADISVPSSS EAISLCLSTN  360
NGSSFFGTGG QECRQYAPPP QPALSATALL QKAAQMGSAA TNASLLRGFG IVSSSSASAS  420
SGQQDSLQWG QQLVEPESAS VTAGLGLGLP CDGVSGLKEL MMGTPSMFGP KHTTLDFLGL  480
GMAAGGTAGG GLSALITSIG GGLDVTAAAS FGNGEFSGKD MGSSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-112	C2H2 family protein