PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027346431.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

E2F/DP

Protein Properties

Length: 470aa MW: 51818.6 Da PI: 4.6181

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027346431.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.9	1.4e-27	145	210	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_027346431.1 145 RYDSSLGLLTKKFINLIKQAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 210 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MSGSRAPPAA AAASSNPPEK IMQSMKRQLP FSSMKPPFVA AGDYHRFAPD HRRNLDQEPE 60 AIVIKTPQLK RKSETAEFEA DSGDRTTPGS TEAANSPFQT PVSGKMGKGG KSSRLTKCNR 120 PGTQTPGSNI GSPSGNNLTP AGPCRYDSSL GLLTKKFINL IKQAEDGILD LNKAADTLEV 180 QKRRIYDITN VLEGIGLIEK KLKNRIQWKG LDVSRPGEAD DSFASLQAEV ENLTIEERRL 240 DEQIREMQER LRGLSEDENN EKLLFVTEED IKNLPCFQNE TLIAIKAPHG TTLEVPDPDE 300 AVDYPQRRYR IVLRSTMGPI DVYLVSQFEE KFEEINGVDV APKFPSSPEL NKHQSTVVPE 360 DRGKDIEVQG QEDGHGSSSD FTTSQDFVSG IMKIVPSDVA SEADYWLLSD ADVSITDMWR 420 TEPGVEWNDL DTLQEDYCMT REHTTSPSHP TPSQPSNVGE LSSASNPTGG

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MSGSRAPPAA AAASSNPPEK IMQSMKRQLP FSSMKPPFVA AGDYHRFAPD HRRNLDQEPE  60
AIVIKTPQLK RKSETAEFEA DSGDRTTPGS TEAANSPFQT PVSGKMGKGG KSSRLTKCNR  120
PGTQTPGSNI GSPSGNNLTP AGPCRYDSSL GLLTKKFINL IKQAEDGILD LNKAADTLEV  180
QKRRIYDITN VLEGIGLIEK KLKNRIQWKG LDVSRPGEAD DSFASLQAEV ENLTIEERRL  240
DEQIREMQER LRGLSEDENN EKLLFVTEED IKNLPCFQNE TLIAIKAPHG TTLEVPDPDE  300
AVDYPQRRYR IVLRSTMGPI DVYLVSQFEE KFEEINGVDV APKFPSSPEL NKHQSTVVPE  360
DRGKDIEVQG QEDGHGSSSD FTTSQDFVSG IMKIVPSDVA SEADYWLLSD ADVSITDMWR  420
TEPGVEWNDL DTLQEDYCMT REHTTSPSHP TPSQPSNVGE LSSASNPTGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-156	E2F/DP family protein