PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027346544.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 210aa MW: 23660 Da PI: 7.3584

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027346544.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	113.8	1.2e-35	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +C aCk lrrkC+++C +ap+fp e++++f+++h++FG +v ++lk++pee re+++++lvy+Aear+rdPv+G++++i++ +++l+ql+++l+ XP_027346544.1 7 PCGACKSLRRKCVAECLFAPHFPVENRQQFECMHHVFGSGHVASILKRVPEEARENIIKTLVYQAEARVRDPVHGCIALITEFENKLHQLQTDLE 101 7********************************************************************************************** PP DUF260 96 llkee 100 ++k+e XP_027346544.1 102 KAKKE 106 *9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MTTRSTPCGA CKSLRRKCVA ECLFAPHFPV ENRQQFECMH HVFGSGHVAS ILKRVPEEAR 60 ENIIKTLVYQ AEARVRDPVH GCIALITEFE NKLHQLQTDL EKAKKELSSY VSPHVMEAFL 120 LNPTSILMPH SYPPVFTYSG HEMAPPFLIL DPQRQDQEMK FNAVYKVVGV GGSVDTSQMQ 180 QQQGEHRVPH ATHNDSGAQQ QLLDQSNSKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	4e-41	LBD family protein