PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346595.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 281aa    MW: 31164.2 Da    PI: 8.0475
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346595.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.74.7e-19136190256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ ++tkeq   Lee F+++++++ ++++ LAk+l+L  rqV vWFqNrRa+ k
  XP_027346595.1 136 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTK 190
                     788899***********************************************98 PP
2HD-ZIP_I/II125.22.9e-40136225191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rl+keq++lLEesF+++++L+p++K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eLr +l
  XP_027346595.1 136 RKKLRLTKEQSALLEESFKQHSTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELR-AL 225
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MGLDQDASNS GLHLILGLAL TSTPQEDTIT PSPSNNSFSS KSNFIQPEPS LTLGLSGESY  60
PPQVVKVPKN IGHNIVSCED PLDLSTQTSP RSAVSSFSSG RIKRERDVSY EEVEPTETER  120
VSSRASDEEE DGTTARKKLR LTKEQSALLE ESFKQHSTLN PKQKQALAKQ LNLRPRQVEV  180
WFQNRRARTK LKQTEVDCEF LKKCCETLTD ENRRLQKELQ ELRALKLAQP LYMPMPAATL  240
TMCPSCERLG GVNGGASPKT PFSMAPKPHF YNPFANPSAA C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185193RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.11e-101HD-ZIP family protein