PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346640.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 200aa    MW: 23118 Da    PI: 9.316
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346640.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.78.4e-16855148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT++Ed +lv  v ++G ++W+  a+  g++Rt+k+c++rw +yl
   XP_027346640.1  8 KGPWTEQEDFKLVYFVSLFGDRRWDYLAKVSGLNRTGKSCRLRWVNYL 55
                     79********************************************97 PP
2Myb_DNA-binding51.52.4e-1661106148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T++E+ l  +++ ++G++ W++Iar+++ gRt++++k++w+++l
   XP_027346640.1  61 RGKLTPQEEHLVMELHSKWGNR-WSRIARKLP-GRTDNEIKNFWRTHL 106
                      8999******************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MVQQEIRKGP WTEQEDFKLV YFVSLFGDRR WDYLAKVSGL NRTGKSCRLR WVNYLHPDLK  60
RGKLTPQEEH LVMELHSKWG NRWSRIARKL PGRTDNEIKN FWRTHLRKKK AQEKKRGETA  120
SPASSSCQSL LSSNNHVVDY SHASKKAGEE SFYDTGGVDG EKGYCYSMDD IWKDIAESEE  180
NINLQPLTPS PTWAHAMGDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.11e-76MYB family protein