PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346826.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 710aa    MW: 78051.7 Da    PI: 6.9981
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346826.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3789.8e-25132233199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++p++ ae++      +++ + s++l+ +d++g++W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F   + ++
  XP_027346826.1 132 FCKTLTASDTSTHGGFSVPRRAAEDCfppldySLQRP-SQELVAKDLHGQEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGDD 223
                     99****************************9966654.569************************************************..3489 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+++++r+
  XP_027346826.1 224 GELRLGIRRA 233
                     999****996 PP
2Auxin_resp117.31.3e-38258339182
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                     +++a+st+++F+v YnPr+ +seF+++v+k++k+l+ ++svGmRf+m+feted++err++G++vg++d++pvrWp+SkWr+L
  XP_027346826.1 258 VVNALSTRCAFSVHYNPRVNSSEFIIPVQKFLKSLDYSYSVGMRFRMRFETEDAAERRFTGLIVGINDVNPVRWPGSKWRCL 339
                     6899*****************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 710 aa     Download sequence    
MAGLIDLNNT TEDDETPSFG SSSVCLELWH ACAGPMISLP KKGSVVVYFP QGHLEHLHDF  60
PLPASLNIPS HVFCRVVHVN LHAEEGSDEV YCQVLLVPES EQVQQKLRGG EIDADGEEED  120
NEAVMKSTPH MFCKTLTASD TSTHGGFSVP RRAAEDCFPP LDYSLQRPSQ ELVAKDLHGQ  180
EWRFRHIYRG QPRRHLLTTG WSAFVNKKKL VSGDAVLFLR GDDGELRLGI RRAAQLKSGS  240
AFSTLSSQQL NPSCLMEVVN ALSTRCAFSV HYNPRVNSSE FIIPVQKFLK SLDYSYSVGM  300
RFRMRFETED AAERRFTGLI VGINDVNPVR WPGSKWRCLL VRWDDLETTR HNRVSPWEIE  360
PYGSASTANN LIAAGLKRTK IGLPSAKLEF PVPNGIGTSD FGESLRFQKV LQGQEMLGVN  420
TTFDSISAQS HQLSELRRCY PGSNCPGIAA TTGNSIRIPQ VSSDLSCNGI GFSESFRFQK  480
VLQGQEILPS QPYARALSVD EACGNGRFGL FDGYQALRSK NGWSSNMNNN SSLLHPPVPS  540
RQVSSPSSVL MFQQAVNPVS TSDYNNKINQ VMKDKVHQRG SYASEVEGGT FVSTPAYEPI  600
LCGLAHEGTN SFAISKLHNQ LDSSCSHDSI SVLRGSQELV SSCKSSCRVF GFSLTEGAPV  660
ANKEADASPV ACQLNSGASF TRHVEDDFHP GHSLRNKAVG SYCTKGVLQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.10.0ARF family protein