PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027346888.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C3H

Protein Properties

Length: 571aa MW: 61117 Da PI: 7.9743

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027346888.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	18.3	4.2e-06	524	546	4	26
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 ++C++f + C+ G++C+F H+ XP_027346888.1 524 KPCMYFKSSRGCRNGSNCPFQHD 546 69********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MKRARKSNRV SWATGGNLCQ VKLFLSEDYP SKVGQRTQDH LQAKISSVLH SSINEPNDLP 60 PGFESSHFLT QSKAEFSHIS QIKWERPPLF VFSPHWRVAA GEESKEKEDQ KLREVRVLEA 120 VYPRLSAIPP SPSVSLDVEE EEYDDTITPL IPIIPIEEEE FTEYDVNPPL NVQSQNTLQY 180 ISGTTPIGPA SNAPCTVSSD ACAKPLPGVS SGLEGDFVAA SAVVATIMKS NEQGRMIDMD 240 LLVKIFNDPE MIEKLINEHG TTATTVSTSA NTVDIPTSGM KPAIPSGPLS TSAPDVSASG 300 TTSTSTVGLL PSGLKPATPS VSLLTPTPDK PATLSASAIP SVSLTSTHDK TATASVPLSR 360 PVSGKPASPS VLLPTHTHTP ALAPAPHMHR PVNQSIHHMS SGMSPASNAR SQKDTVLASG 420 QKRAASLASI SSSELSSVPL PPATGNLHAV NQAKSTASAM PYKLSTGSAF AVKDANYYKN 480 LIRQHGADKQ DMQDSHLGNR HSNFQDMKLV HNIKHGEVKH KIQKPCMYFK SSRGCRNGSN 540 CPFQHDVSVQ WGAGNVLGAQ NAKRLKLGPE I

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MKRARKSNRV SWATGGNLCQ VKLFLSEDYP SKVGQRTQDH LQAKISSVLH SSINEPNDLP  60
PGFESSHFLT QSKAEFSHIS QIKWERPPLF VFSPHWRVAA GEESKEKEDQ KLREVRVLEA  120
VYPRLSAIPP SPSVSLDVEE EEYDDTITPL IPIIPIEEEE FTEYDVNPPL NVQSQNTLQY  180
ISGTTPIGPA SNAPCTVSSD ACAKPLPGVS SGLEGDFVAA SAVVATIMKS NEQGRMIDMD  240
LLVKIFNDPE MIEKLINEHG TTATTVSTSA NTVDIPTSGM KPAIPSGPLS TSAPDVSASG  300
TTSTSTVGLL PSGLKPATPS VSLLTPTPDK PATLSASAIP SVSLTSTHDK TATASVPLSR  360
PVSGKPASPS VLLPTHTHTP ALAPAPHMHR PVNQSIHHMS SGMSPASNAR SQKDTVLASG  420
QKRAASLASI SSSELSSVPL PPATGNLHAV NQAKSTASAM PYKLSTGSAF AVKDANYYKN  480
LIRQHGADKQ DMQDSHLGNR HSNFQDMKLV HNIKHGEVKH KIQKPCMYFK SSRGCRNGSN  540
CPFQHDVSVQ WGAGNVLGAQ NAKRLKLGPE I