PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346894.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family LBD
Protein Properties Length: 235aa    MW: 25677.3 Da    PI: 8.5085
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346894.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26098.28.6e-312103197
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr++C+++C+l+p++     +++q +++ +v+k+FG++ ++++++++p+++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+
  XP_027346894.1   2 SCNGCRVLRKGCSESCILRPCLqwmetAEAQGHATVFVAKFFGRAGLMSFISNVPQNQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQA 96 
                     6*********************9999777889*************************************************************** PP

          DUF260  91 kaelall 97 
                     ++e++l+
  XP_027346894.1  97 AVETVLR 103
                     *998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MSCNGCRVLR KGCSESCILR PCLQWMETAE AQGHATVFVA KFFGRAGLMS FISNVPQNQR  60
PALFQSLLFE ACGRTVNPVN GAVGLLWTGN WHVCQAAVET VLRGGTLRPI PELMGLEAPA  120
SAADEASEAE VACTDTWRIR EPNPNPNFRF TSSRSHNKVS SSGKRKRSEE LVKLQAGPNL  180
DLRLTPIFLQ KVEKRRSGSP SMTSEESVTT TACLESGIGD QWGHGGDRKV LNLFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.17e-83LBD family protein