PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027346974.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 271aa MW: 29626.3 Da PI: 6.6969

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027346974.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.9	1.4e-11	77	122	3	53
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 ++h+e+ErrRR+riN +++Lr l+P+ +K++Ka+ L +++ +++ XP_027346974.1 77 KSHSEAERRRRERINGHLATLRGLVPST-----EKMDKATLLAEVISQVNE 122 58***********************8.....7******999876655 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MVYSFYDKSS SSGSDVSGLF HPTFHNLGAS NDVSRGGLSS QHSLDFESEK GEMVKCPSSE 60 KVGKNDVSEA KALAALKSHS EAERRRRERI NGHLATLRGL VPSTEKMDKA TLLAEVISQV 120 NELKKNAVEA SKGFLIPMDA DEVKVEPYDE GGDGSMSYSA TICCDFRPEI LSDLRQTLDA 180 LQLHLVRAEI STLAGRMKNI FVFTCCKRDN SNNIEACQAL AGNVQQALCS VLDKASSSLE 240 FSLRTSHPSK RRRLCFIETS TSSCNHESCS C

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	83	88	ERRRRE
2	250	254	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	6e-36	bHLH family protein