PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027346991.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 305aa    MW: 32670.8 Da    PI: 4.4846
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027346991.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.22.9e-05280302223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ C+ksF++ s L++H +  H
  XP_027346991.1 280 SCKSCKKSFTSESGLQQHNKAkH 302
                     7*****************88766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MEVPMEFWGV EVKVGQSVKI DPAEPSSGYI HVSQVALGEA KKDKASEPVV LYLKVDDQKF  60
VLGTLSRDDI PQLSLDLVLD SESEFSHNSK SASVYFCGYK VLTGTSDDGN VSDFSDSDDD  120
LALKGQDNGK PEIKAEVAKV AKTPKPVPMV GASAEQVKIV DPKKDEKDES DDDSDDESAD  180
EDDSGSSDEM DADSDSDEDS ESDEDDEETP VKKVELGKKR ANESASKTPV PNKKAKNATP  240
EKTDGKKFVH TATPHPMKKG GKTLNSGAKG QSPNSGGQLS CKSCKKSFTS ESGLQQHNKA  300
KHGGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03740.13e-21C2H2 family protein