PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347174.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 669aa MW: 74531.3 Da PI: 8.4834

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347174.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.8	2.4e-08	549	598	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ eE e lv+av+++G+g+W+ + + k+Rt ++k++w ++ XP_027347174.1 549 RRPFSVEEVEALVQAVEKMGTGRWRDVKLCAFdnaKHRTYVDLKDKWKTL 598 679***********************99999************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence
MVLQKRLDYG FNGCQVPAMP RASRSTRRRR KFQRRAEDNQ MRAFDLLATI ADKLLQEKEN 60 PTMSSDTSSE KDQRGFVKEC QDANKPSKSE LSDEGNCNKK CCSHLSSQTN NQNCCLKEFQ 120 HAELDGHPGI TSIVTSSSCL ERFFADKLVD GKSHIKMENF TSKVKLDFSG YPKDSHFKVD 180 GDTSKGKDGL HKTEKVPNGI GSAEDPLDEN PPAFISLGGN PKFSGYSDRI PCSSLSKACD 240 NVLVVSRDDD ENSSGCTHPS STKTKSLRVK TCIGDNRISK TLASKFRKVA EKSKDDTLSN 300 CDGDLKRTYH SKKNCNKRQN SQMNIPFKKR KLFNDPGISS LEECQHQTIR CRGSHVKLRI 360 KSFRVPELFF EVPETSTIGS LKRTVMDAVT AVLGGELHIG VILQGKKVWD DSKTLLQTGI 420 SHDNQLDALG FTLEPNSLQS LPIVCAAHSL HPSADITQPV TRYPSSPAVI HQRIQGNSDI 480 LPEHQVTSLG SILESDHDSA PSPINASVDE GTTDIKELVT VPEIDKEELA MVPVLQKPKR 540 SEVIQRRIRR PFSVEEVEAL VQAVEKMGTG RWRDVKLCAF DNAKHRTYVD LKDKWKTLVH 600 TARISPQQRR GEPVPQELLD RVLVAHAYWS QQQAKQQPKQ HPESALSLRV LSATSDLVDG 660 MGVLVSDCY

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence

MVLQKRLDYG FNGCQVPAMP RASRSTRRRR KFQRRAEDNQ MRAFDLLATI ADKLLQEKEN  60
PTMSSDTSSE KDQRGFVKEC QDANKPSKSE LSDEGNCNKK CCSHLSSQTN NQNCCLKEFQ  120
HAELDGHPGI TSIVTSSSCL ERFFADKLVD GKSHIKMENF TSKVKLDFSG YPKDSHFKVD  180
GDTSKGKDGL HKTEKVPNGI GSAEDPLDEN PPAFISLGGN PKFSGYSDRI PCSSLSKACD  240
NVLVVSRDDD ENSSGCTHPS STKTKSLRVK TCIGDNRISK TLASKFRKVA EKSKDDTLSN  300
CDGDLKRTYH SKKNCNKRQN SQMNIPFKKR KLFNDPGISS LEECQHQTIR CRGSHVKLRI  360
KSFRVPELFF EVPETSTIGS LKRTVMDAVT AVLGGELHIG VILQGKKVWD DSKTLLQTGI  420
SHDNQLDALG FTLEPNSLQS LPIVCAAHSL HPSADITQPV TRYPSSPAVI HQRIQGNSDI  480
LPEHQVTSLG SILESDHDSA PSPINASVDE GTTDIKELVT VPEIDKEELA MVPVLQKPKR  540
SEVIQRRIRR PFSVEEVEAL VQAVEKMGTG RWRDVKLCAF DNAKHRTYVD LKDKWKTLVH  600
TARISPQQRR GEPVPQELLD RVLVAHAYWS QQQAKQQPKQ HPESALSLRV LSATSDLVDG  660
MGVLVSDCY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53790.1	9e-62	MYB_related family protein