PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347330.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 653aa MW: 72378.1 Da PI: 6.6976

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347330.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	39.1	1.9e-12	310	366	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+a++ a++k++g XP_027347330.1 310 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqSRKGRQ-GGYDMEEKAARAYDLAALKYWG 366 78*****************87776664446655.77****************98 PP
2	AP2	41	4.7e-13	411	461	3	55
AP2 3 ykGV.rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV +++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_027347330.1 411 YRGVtSRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 461 9**99******988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 653 aa Download sequence
MKGMENDDTV DVNNQNNWLG FSLSPQINIG VPSHTHQSQP SSAAAAAAAE VVPTSFYHSA 60 PLNNYAFYYG LEAENVGLYS ALPIMPLKSD GSLFGMDALS RSQAQAMATS STPKLENFLG 120 GEAMGTPHYE CSATETMPLS LDSFYQNHVQ QHINTQQQQH QQQELQAQHL SYYSTLRNHD 180 VMLEGSKQSQ TSDSNVQVPN MGEDGVPGLK SWVVRNFAAS HAQESKMIVA VEENGGESGS 240 IGSMAYGDLQ SLSLSMSPSS QSSCVTSSQR ASPAVIDSVA MDTKKRGPEK VDQKQIVHRK 300 SIDTFGQRTS QYRGVTRHRW TGRYEAHLWD NSCKKEGQSR KGRQGGYDME EKAARAYDLA 360 ALKYWGPSTH INFPLENYQN ELEQMKNMTR QEYVAHLRRK SSGFSRGASM YRGVTSRHHQ 420 HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR GVNAVTNFDI TKYDVEKIMA 480 SSNLLSSELA RRNKETDGGT QYIDHQPSAY DDTQEAILMQ KSSESQSDQW KMVLYQSPQQ 540 LDLQNPPRIE TQRGNQSFSV VGLDNIFHQE VEESSKMRTH VSNPSSLATS LSSSREGSPD 600 RTSLPMLSGM PSTASKLLAT NPNSNMNSWD PSPHLRPALS LPHMPVFAAW TDA

Sequence ? help Back to Top

Protein Sequence Length: 653 aa Download sequence

MKGMENDDTV DVNNQNNWLG FSLSPQINIG VPSHTHQSQP SSAAAAAAAE VVPTSFYHSA  60
PLNNYAFYYG LEAENVGLYS ALPIMPLKSD GSLFGMDALS RSQAQAMATS STPKLENFLG  120
GEAMGTPHYE CSATETMPLS LDSFYQNHVQ QHINTQQQQH QQQELQAQHL SYYSTLRNHD  180
VMLEGSKQSQ TSDSNVQVPN MGEDGVPGLK SWVVRNFAAS HAQESKMIVA VEENGGESGS  240
IGSMAYGDLQ SLSLSMSPSS QSSCVTSSQR ASPAVIDSVA MDTKKRGPEK VDQKQIVHRK  300
SIDTFGQRTS QYRGVTRHRW TGRYEAHLWD NSCKKEGQSR KGRQGGYDME EKAARAYDLA  360
ALKYWGPSTH INFPLENYQN ELEQMKNMTR QEYVAHLRRK SSGFSRGASM YRGVTSRHHQ  420
HGRWQARIGR VAGNKDLYLG TFSTQEEAAE AYDIAAIKFR GVNAVTNFDI TKYDVEKIMA  480
SSNLLSSELA RRNKETDGGT QYIDHQPSAY DDTQEAILMQ KSSESQSDQW KMVLYQSPQQ  540
LDLQNPPRIE TQRGNQSFSV VGLDNIFHQE VEESSKMRTH VSNPSSLATS LSSSREGSPD  600
RTSLPMLSGM PSTASKLLAT NPNSNMNSWD PSPHLRPALS LPHMPVFAAW TDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-124	AP2 family protein