PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347375.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Protein Properties

Length: 468aa MW: 52742.1 Da PI: 7.0245

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	63.5	3.3e-20	103	193	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+k l++s+v + ++ lp f+++h +e+++t++ledesg++++ k+i +k++ l++GW++F ++L+egD++vF+l++ ++f +v XP_027347375.1 103 FVKSLVRSHVASCFWMGLPVAFCKRHL--PEKDTTIILEDESGKEYKTKYIACKTG----LSAGWRQFSAVHKLQEGDVLVFQLVEPTKF--KVY 189 89**********************5..45778************777776....*********************9876666..999 PP EE-S CS B3 96 vfrk 99 ++r+ XP_027347375.1 190 IIRA 193 9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MVVVDDQAVT VAYYVEELHE DVPLSHFARI STLNTDKQNK TVENKYKLLN NHIKQGTPGD 60 AQMFASSVKV ATDGTSSRGE ALSSAVIRAE QVQSKLQPEF PSFVKSLVRS HVASCFWMGL 120 PVAFCKRHLP EKDTTIILED ESGKEYKTKY IACKTGLSAG WRQFSAVHKL QEGDVLVFQL 180 VEPTKFKVYI IRANNLRELD GALSLLNLDS CTKQKVGGKD NADTDAVTCK SPKRKHGKTV 240 PLNVQKKKKT NVSRLGPKAR LSEEVEESEN GSDDALSEVL EGFKMLEFKD VKGFENFSII 300 VDGMPIDGEF STEVRNKYYR LCCSQQAFLH ENLIKGMNYK LIAGIISETV NIADAIKVSV 360 ICTPRFEFAN WDKTLLAFEH LGMNVQFLRV RLRRLVSIAY ETDDASETRR FLAYRNEHSQ 420 ADDEIKNMET KLQELKGACD DFGAYLESLK CKAESYQLEF QKEVAAPW

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MVVVDDQAVT VAYYVEELHE DVPLSHFARI STLNTDKQNK TVENKYKLLN NHIKQGTPGD  60
AQMFASSVKV ATDGTSSRGE ALSSAVIRAE QVQSKLQPEF PSFVKSLVRS HVASCFWMGL  120
PVAFCKRHLP EKDTTIILED ESGKEYKTKY IACKTGLSAG WRQFSAVHKL QEGDVLVFQL  180
VEPTKFKVYI IRANNLRELD GALSLLNLDS CTKQKVGGKD NADTDAVTCK SPKRKHGKTV  240
PLNVQKKKKT NVSRLGPKAR LSEEVEESEN GSDDALSEVL EGFKMLEFKD VKGFENFSII  300
VDGMPIDGEF STEVRNKYYR LCCSQQAFLH ENLIKGMNYK LIAGIISETV NIADAIKVSV  360
ICTPRFEFAN WDKTLLAFEH LGMNVQFLRV RLRRLVSIAY ETDDASETRR FLAYRNEHSQ  420
ADDEIKNMET KLQELKGACD DFGAYLESLK CKAESYQLEF QKEVAAPW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	233	249	KRKHGKTVPLNVQKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	1e-35	B3 family protein