PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027347530.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family SBP
Protein Properties Length: 144aa    MW: 16793.4 Da    PI: 7.4726
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027347530.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP135.91.2e-4263138277
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                     Cqv++C+adlseak+yhrrhkvCe h+kap+v ++gl+qrfCqqCsrfhe+sefD++krsCrrrLa+hnerrrk++
  XP_027347530.1  63 CQVNNCDADLSEAKQYHRRHKVCEYHAKAPSVHIAGLQQRFCQQCSRFHEVSEFDDSKRSCRRRLAGHNERRRKNA 138
                     **************************************************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MDTGRSEGKR TLRYKEEEDE EEEEEEEINE MGFGEDGRRN KRVMRDLCGK RGSKGGSSMP  60
PSCQVNNCDA DLSEAKQYHR RHKVCEYHAK APSVHIAGLQ QRFCQQCSRF HEVSEFDDSK  120
RSCRRRLAGH NERRRKNAVD YHGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.11e-42SBP family protein