PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027347755.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C3H
Protein Properties Length: 355aa    MW: 39703.2 Da    PI: 7.5697
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027347755.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.94e-09128149526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C+ ++r G C++Gd C F+Hg
  XP_027347755.1 128 VCPEYRRAGGCSRGDACEFSHG 149
                     7********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MSSVCAEHKF QLQPSHQLLS LKKSLRDIDI PPRKLLTRRA SAAAARDGAG DLFSDDTLFQ  60
KYLPHNDQVE SDDDSGDPYA SDDFRMFEFK VRRCTRSRSH DWTDCPFAHP GEKARRRDPR  120
RFHYSGTVCP EYRRAGGCSR GDACEFSHGV FECWLHPSRY RTEACKDGKN CKRKVCFFAH  180
TPRQLRVLPL NENNNNKCNS NMSKNNHCCV FCHCCSSSST CSPTSTLFGM SHFSPPLSPS  240
SSSSPSSSSR FVGSESNHPG VVSYKDVFSE LMCSLEGLNF GEASPVSAST PHNLSWLDVS  300
FNSEDQQQFI LSPTITSSIF SNNGKCSSGK FSREENRVVD DVIAPDLGWV NDLLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03790.12e-68C3H family protein