PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027347803.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 153aa    MW: 17166 Da    PI: 10.3918
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027347803.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.0009579101123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++Cp+Cg  F     L  H+r+H
  XP_027347803.1  79 HQCPICGLEFEIGQALGGHMRKH 101
                     79*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MKRGRDIDMA NCLMLLPKVG ENCTNPSRDR VLKGGAFQCK TCNRQFLSFQ ALGGHRASHK  60
KLKLMASNLS CSTMKPKVHQ CPICGLEFEI GQALGGHMRK HRAAINNGFT NHDHAVPKSN  120
ATKRFRLCLD LNLTPYENDQ NLNLRTPALN FFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.17e-33C2H2 family protein