PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027347850.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 212aa    MW: 24849.1 Da    PI: 6.8067
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027347850.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.41.2e-1854107457
                     -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
        Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                     ++++t eq++ Le+ F +++++  +++ +LA +lgL+ rqV vWFqNrR ++k+
  XP_027347850.1  54 KRKLTVEQVNLLEQNFGNEHKLESQRKDRLALELGLDPRQVAVWFQNRRSRWKN 107
                     5689************************************************95 PP
2HD-ZIP_I/II110.31.3e-3553143292
     HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                     kkr+l+ eqv+lLE++F +e+kLe++rK +la eLgl+prqvavWFqnrR R+k+k+lE++y+ Lk+ ++a+  e+++Le+ev +L+++l 
  XP_027347850.1  53 KKRKLTVEQVNLLEQNFGNEHKLESQRKDRLALELGLDPRQVAVWFQNRRSRWKNKKLEEEYTNLKNLHEAILLEKCHLEAEVLKLEKQLL 143
                     9**************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MNHLPIEDHV MPFSQLYPDS FAQITPQQGE NKPRRRRNKK NKGGENGAMD TVKKRKLTVE  60
QVNLLEQNFG NEHKLESQRK DRLALELGLD PRQVAVWFQN RRSRWKNKKL EEEYTNLKNL  120
HEAILLEKCH LEAEVLKLEK QLLEANKEIQ RLLERADRAP SNSSNSSQSQ SMDAVNPPFL  180
GEFSVEVYDD GDVFYIPETH YINGMEWINL YM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13456RRRRNKKNKGGENGAMDTVKKRK
23557RRRRNKKNKGGENGAMDTVKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36740.12e-62HD-ZIP family protein