PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347867.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 320aa MW: 36559.7 Da PI: 4.5213

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347867.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58	1.6e-18	81	134	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t++q++ Le+ Fe ++++ e++ +LAk+lg++ rqV +WFqNrRa+ k XP_027347867.1 81 KKRRLTSDQVQFLESNFEVENKLEPERKVQLAKELGMQPRQVAIWFQNRRARFK 134 56689***********************************************98 PP
2	HD-ZIP_I/II	128	3.9e-41	81	172	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrl+++qv++LE++Fe e+kLeperKv+la+eLg+qprqva+WFqnrRAR+ktkqlEk+y Lk++yd lk++ ++L +e+ +L+ee+++ XP_027347867.1 81 KKRRLTSDQVQFLESNFEVENKLEPERKVQLAKELGMQPRQVAIWFQNRRARFKTKQLEKEYGILKASYDILKSDYDKLLQENGKLKEEVNS 172 9**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MAGEKLSGGS SMTILLQNES LPCSSELVHS LWLQNSQPSF HGSKSLFDVV NVTDRPLFHG 60 LEKEEKGDDE DYEVCFRQPG KKRRLTSDQV QFLESNFEVE NKLEPERKVQ LAKELGMQPR 120 QVAIWFQNRR ARFKTKQLEK EYGILKASYD ILKSDYDKLL QENGKLKEEV NSLKNRLLPQ 180 EKEEHNLDDT SCDAVNSQHK EREDLIINTG SENGSKGPLP VMVICKQEYA NSAKSDVLDS 240 ESPHFTDGNQ SSFVEPADSS HALEPDHSDF SQDDEDILSQ NLLTLPFLPK IEDVCYGEPL 300 ENPCSFRFPV EDQTFCFWSY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	129	137	RRARFKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	4e-41	HD-ZIP family protein