PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027347874.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HD-ZIP

Protein Properties

Length: 216aa MW: 24407 Da PI: 8.768

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027347874.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62	9.1e-20	65	119	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq + Lee F++n++++ +++e LA++l+L rqV vWFqNrRa+ k XP_027347874.1 65 RKKLRLTKEQSRLLEESFRQNHTLNPKQKEALAMQLKLRPRQVEVWFQNRRARSK 119 78889************************************************98 PP
2	HD-ZIP_I/II	118.7	3.1e-38	65	153	1	89
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq++lLEesF+++++L+p++K++la +L+l+prqv+vWFqnrRAR k+kq+E+++e+Lkr++ +l+e+n+rL++eveeLr+ XP_027347874.1 65 RKKLRLTKEQSRLLEESFRQNHTLNPKQKEALAMQLKLRPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRA 153 69*************************************************************************************94 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MAVLPRSSSS LELTMSVPGF ASSPTLPLFG ITVKELDINQ VPLEEDWMAS NMEDEEESSN 60 GDPPRKKLRL TKEQSRLLEE SFRQNHTLNP KQKEALAMQL KLRPRQVEVW FQNRRARSKL 120 KQTEMECEYL KRWFGSLTEQ NRRLQREVEE LRAMKVGPPT VISPHTCEPL PASTLTMCPR 180 CERVTTTADK AATVAATLSA KVPSPSLQSR QPSAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	122	RRARSKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01430.1	2e-81	HD-ZIP family protein