PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027347940.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB_related
Protein Properties Length: 259aa    MW: 29302 Da    PI: 7.6297
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027347940.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.51.1e-11109149444
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                      WT+ E+ell++++ ++G+g+W+ Ia+++  ++t+ +++s+ 
   XP_027347940.1 109 WTQTEHELLLRGILKYGKGHWSEIAKHFLPNKTEQEIQSYA 149
                      ****************************99********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MMVEIIDLRD ALPSPRRASN ATKIDVSVKK DQFEKNPISS RACAKSNSHR RSQQQTTPWP  60
SSKYTYEPSH IASRFQLGVH GERIATVPTP IPESNTYLFP QGASLNELWT QTEHELLLRG  120
ILKYGKGHWS EIAKHFLPNK TEQEIQSYAT SFFTNLPYTH PEDYCTRKQT FFANSLIPTD  180
KMSASLSNVM PMIDNKPQQT LMLFLEETSF FLVPSNGEAS SNTKTNMYGS QMQIGDENTS  240
MNASVNGEVD LELRLGRCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.13e-09MYB family protein