PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027348069.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family YABBY
Protein Properties Length: 256aa    MW: 28911.3 Da    PI: 9.3102
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027348069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY1458e-4591561163
           YABBY   1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesasts 95 
                     +d++  s+++Cyv+CnfCnt+lav +P + l+  vtv+CGhC++l  +  + ++++  + +h            l  ++  +   + k+  as+s
  XP_027348069.1   9 MDMVPPSDHLCYVRCNFCNTVLAVGIPCKRLLDAVTVKCGHCSNLSFLRTRPQHNQNQCIDH-----------SLSLQG--FYC-DFKKGLASSS 89 
                     578899**************************************977665555555555554...........222222..222.1222222222 PP

           YABBY  96 vsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163
                      ss   +++++  +p++ p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafsaaaknWa +
  XP_027348069.1  90 SSS--STKSREPVSPKAAPfVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARY 156
                     222..1344556677777769**********************************************76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MNHEEKVTMD MVPPSDHLCY VRCNFCNTVL AVGIPCKRLL DAVTVKCGHC SNLSFLRTRP  60
QHNQNQCIDH SLSLQGFYCD FKKGLASSSS SSSTKSREPV SPKAAPFVVK PPEKKHRLPS  120
AYNRFMKEEI QRIKAANPEI PHREAFSAAA KNWARYIPNS PTNSVSAIKN DEKYRNGLLP  180
NWHSSSGPVE CAVKGQMDTV SHYCMSMSWA GLHGLHLLFL AELLRLFYFD MLFLFIRQVR  240
LQLPRRTGVA KGEAED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.11e-62YABBY family protein