PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348105.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 474aa MW: 52176.7 Da PI: 7.3759

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348105.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	46.9	7.1e-15	196	255	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa a++ a++k++g XP_027348105.1 196 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqvRKgRQVYLGGYDKEEKAAIAYDLAALKYWG 255 57*****************666665587447***********************98 PP
2	AP2	51.5	2.5e-16	298	349	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_027348105.1 298 SVYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 349 78**************988532...5***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MAGATNWLTF SLTPMEMLRS SDSQFVPYDT PSHCFVDNFY ANNGWTNSKS EMVNQNQAQS 60 LSDPTTLPSL MASQNENQSL AVPKIEDFFD NQTDTQDSSL TQIYDHGTAS AAYFSDQQDL 120 KAIAGFQALS ATNSGSELDD SASNKTRGAP GELGANSVES SKGALSARDG SKDKAIVGVE 180 FDNPKKVAHT FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR REGQVRKGRQ VYLGGYDKEE 240 KAAIAYDLAA LKYWGPTATT NFPVSKYSKE LEEMKSTGKQ EFIASLRRKS SGFSRGASVY 300 RGVTRHHQQG RWQARIGRVA GNKDLYLGTF ATEEEAAEAY DIAAIKFRGA SAVTNFEMSR 360 YDVEAILKNS LPVGGASKRL KLSHESENKA PMSGTQQPQC SKVSSSINFS TIQPVASIPY 420 DSATTYYPHN LFPHFYPTNS GISTVESAAT MTNATTLTTL PAPPEFFIWP HQPY

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MAGATNWLTF SLTPMEMLRS SDSQFVPYDT PSHCFVDNFY ANNGWTNSKS EMVNQNQAQS  60
LSDPTTLPSL MASQNENQSL AVPKIEDFFD NQTDTQDSSL TQIYDHGTAS AAYFSDQQDL  120
KAIAGFQALS ATNSGSELDD SASNKTRGAP GELGANSVES SKGALSARDG SKDKAIVGVE  180
FDNPKKVAHT FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR REGQVRKGRQ VYLGGYDKEE  240
KAAIAYDLAA LKYWGPTATT NFPVSKYSKE LEEMKSTGKQ EFIASLRRKS SGFSRGASVY  300
RGVTRHHQQG RWQARIGRVA GNKDLYLGTF ATEEEAAEAY DIAAIKFRGA SAVTNFEMSR  360
YDVEAILKNS LPVGGASKRL KLSHESENKA PMSGTQQPQC SKVSSSINFS TIQPVASIPY  420
DSATTYYPHN LFPHFYPTNS GISTVESAAT MTNATTLTTL PAPPEFFIWP HQPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.2	1e-154	AP2 family protein