PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348111.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MIKC_MADS

Protein Properties

Length: 200aa MW: 23330.7 Da PI: 9.5515

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348111.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	78.7	4e-25	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +i++ + rqvtf+kRr+g++KKAeELSvLCda+va+i+f s g+l+ ys+ XP_027348111.1 10 KIDDATTRQVTFAKRRKGLFKKAEELSVLCDADVALIVFNSYGRLFHYSN 59 699*********************************************85 PP
2	K-box	43.4	1.4e-15	88	166	16	95
K-box 16 slqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 +++ a+L + +e+ ++R+l+GedLe L+++eLqqLe+ e+ l+++ +kK+e +++ ++ l+ kek+l e+n++L XP_027348111.1 88 LISNNNARLSEVYEKS-LQLRQLKGEDLEGLDIEELQQLERSFETRLRHVIEKKEEKIINDMRILRGKEKQLMEANERLL 166 4455556666666552.3469********************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MGKKKIQINK IDDATTRQVT FAKRRKGLFK KAEELSVLCD ADVALIVFNS YGRLFHYSNL 60 RMKEVLERHH LYSKNWAKLE QPSPELELIS NNNARLSEVY EKSLQLRQLK GEDLEGLDIE 120 ELQQLERSFE TRLRHVIEKK EEKIINDMRI LRGKEKQLME ANERLLNHGI VTDISTGKRH 180 SSENNGNSDP WLKLGLPYSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	7e-54	MIKC_MADS family protein