PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348124.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 336aa MW: 37902.7 Da PI: 6.4286

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348124.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.4	6.9e-10	159	204	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++ L +P + kK++Ka +L++Av+Y k+Lq XP_027348124.1 159 HIIAERKRRQELTGSIIALSATIPGL-----KKMDKAYVLREAVNYTKQLQ 204 899*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MEMEKEDILN NQSHSSFNEQ EFLREILQYP ENFSPEREQY PSPCYTIQNN NTSVEGGATS 60 PTNSSLSFDE TSLCGNDGTL HKSNSSNSIK SFERGVCSPF TYLLSFDNST AEPIIHGSPK 120 LNSAFGSNKR AIVKDGSELE SRMSQTRKKV RGSSETHDHI IAERKRRQEL TGSIIALSAT 180 IPGLKKMDKA YVLREAVNYT KQLQERIKEL ENQIKDKRGD STIFIKKSRA SSDKNIGKCE 240 KNTESPFEVE ARVLEKEVLI GIHCEKQKDI VFKIHVLLEK LHLSITSSSV LPFGTSTLII 300 NIIAQMGDEY SMTMDDLVKN MREYLLEHMS CNSDPC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	147	167	RKKVRGSSETHDHIIAERKRR
2	163	168	ERKRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	1e-44	bHLH family protein