PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348131.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 456aa MW: 51104.5 Da PI: 8.6835

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348131.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.3	2.5e-12	282	329	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ Er+RR++i++++++Lr+l+P+ +K++ +iL A++YIk+Lq XP_027348131.1 282 AKNLVTERNRRNKIKKGLFTLRSLVPNI-----TKMDREAILADAIDYIKELQ 329 556678*******************7.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MTGLGVVEWL RPLVETKAWD YVVLWKYGDD PTRFFEWVGC CCRGSCNGNI EEVKPEEEMG 60 KLYHLAPICR DTFQHSVRTK ACEALAQLPF ALSLYSGSLS YSHSDSIGTQ VLIPIVGGLI 120 ELFTAKLIPM DMNTIEFITA HACATVKQEA KSAQSYTNLN IKEQLPLSEQ YSQCWPQHMP 180 NLTPSIHLPA TKQCSSHLSI EGPSSGSNPS TEEPSFDSTF ARTIPHEYLK QPVKISPICK 240 NKRPKYNETS GKKQRGLSSH CGTGEKDKSK LVKEPQKDGF RAKNLVTERN RRNKIKKGLF 300 TLRSLVPNIT KMDREAILAD AIDYIKELQI QVKKLNDEVR DLEVQDCEKN TQFNIKAGKK 360 QGGTRTNPLN QSSSDCVKKT QMEAQAEVHH ISKTSFLIKL HGEQKQGGFS KLMEAIHSFG 420 LQVANVNMTT FDGKVLSILT VEDSRTKHSS NSILVW

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MTGLGVVEWL RPLVETKAWD YVVLWKYGDD PTRFFEWVGC CCRGSCNGNI EEVKPEEEMG  60
KLYHLAPICR DTFQHSVRTK ACEALAQLPF ALSLYSGSLS YSHSDSIGTQ VLIPIVGGLI  120
ELFTAKLIPM DMNTIEFITA HACATVKQEA KSAQSYTNLN IKEQLPLSEQ YSQCWPQHMP  180
NLTPSIHLPA TKQCSSHLSI EGPSSGSNPS TEEPSFDSTF ARTIPHEYLK QPVKISPICK  240
NKRPKYNETS GKKQRGLSSH CGTGEKDKSK LVKEPQKDGF RAKNLVTERN RRNKIKKGLF  300
TLRSLVPNIT KMDREAILAD AIDYIKELQI QVKKLNDEVR DLEVQDCEKN TQFNIKAGKK  360
QGGTRTNPLN QSSSDCVKKT QMEAQAEVHH ISKTSFLIKL HGEQKQGGFS KLMEAIHSFG  420
LQVANVNMTT FDGKVLSILT VEDSRTKHSS NSILVW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	290	297	NRRNKIKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	6e-29	bHLH family protein