PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348182.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 225aa MW: 26069 Da PI: 8.4766

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348182.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	118.9	3e-37	11	108	1	98
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++r+kC+++C+lapyfp++++++f +vh++FG+sn++kl+k+++ee+r+++++sl++eA++r+rdP++G +g ++k+ ++++++ el+ XP_027348182.1 11 ACAACKHQRKKCSENCILAPYFPSNRNREFHAVHRVFGVSNITKLVKNAKEEDRRRVVDSLIWEACCRQRDPIHGPYGEYTKVYNEYKKVLDELK 105 7****************************************************************************************999998 PP DUF260 96 llk 98 + + XP_027348182.1 106 RFR 108 765 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MQRNTNGMHP ACAACKHQRK KCSENCILAP YFPSNRNREF HAVHRVFGVS NITKLVKNAK 60 EEDRRRVVDS LIWEACCRQR DPIHGPYGEY TKVYNEYKKV LDELKRFRGQ NHLLQLPPLG 120 LKSVQDLIAC NGTKGEHKAE VDNALDYLHG NKNGIIDSNI YSTYCSNYLQ EFQNIRPEVV 180 MPFQQHSQPY FIAGINDFCC HRLISIILFF LYEVWVVITA LLCGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06280.1	1e-37	LBD family protein