PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348207.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 233aa MW: 27353.3 Da PI: 6.2419

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348207.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.7	2.3e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++l+ +++++G ++W+ ++ g+ R++k+c++rw +yl XP_027348207.1 14 KGAWSEEEDQRLLAYIERYGHPNWRQLPKFAGLARCGKSCRLRWMNYL 61 79********************************************97 PP
2	Myb_DNA-binding	55.6	1.2e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+ E++++ d++k++G++ W++Ia+ ++ gRt++++k++w+++l XP_027348207.1 67 RGNYTQKEEQIITDLHKKHGNK-WSLIAENLP-GRTDNEIKNYWHSHL 112 899*****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MVRAPYFDKN GIKKGAWSEE EDQRLLAYIE RYGHPNWRQL PKFAGLARCG KSCRLRWMNY 60 LRPNLKRGNY TQKEEQIITD LHKKHGNKWS LIAENLPGRT DNEIKNYWHS HLKKFLRRNE 120 NTTCHELKSE YIEFEGPISE GVSVDSHHIL ESSVSMSSET SYPEDNSPSF SSSHRESTLN 180 LSREEDSVAS WETLDAFSSN FWTEPFISEN ALDQNYFPIS CYGAEREEPF FLW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	3e-56	MYB family protein