PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348208.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 241aa MW: 27699.9 Da PI: 5.6013

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348208.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.3	5.6e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ eEde+l v+++G +W+ ++ g+ R++k+c++rw++yl XP_027348208.1 14 KGAWSREEDERLRVFVQKHGHSNWRQLPKFAGLARCGKSCRLRWLNYL 61 79********************************************97 PP
2	Myb_DNA-binding	59.4	7.8e-19	68	111	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g++T+eE+e+++++++++G++ W+ Ia++++ gRt++++k++w+++ XP_027348208.1 68 GNFTKEEEEIIIKLHQEFGNR-WSVIAEKLP-GRTDNEIKNHWHSH 111 89*****************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MVRAAFYDKN GLKKGAWSRE EDERLRVFVQ KHGHSNWRQL PKFAGLARCG KSCRLRWLNY 60 LKPNLKHGNF TKEEEEIIIK LHQEFGNRWS VIAEKLPGRT DNEIKNHWHS HIKKSLKSHE 120 ITPYVSKIDD NSVEENLNET NEFVKSKSPC ADVGDSLYHI LESSLTVSTE TSEGDNTSNV 180 AQSTVNCSIS KEDTAPPLVT YEEFIGDFWT QPFLVEDQDT YTDEICNAES LILNFDGTYL 240 L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	6e-57	MYB family protein