PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348209.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 330aa MW: 37511.4 Da PI: 4.7205

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348209.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.4	5.1e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+ +v+++G +W+ +r g+ R++k+c++rw +yl XP_027348209.1 14 KGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWMNYL 61 799***************99**********************97 PP
2	Myb_DNA-binding	62.5	8.2e-20	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eE+e++++ +k+lG++ W++Ia++++ gRt++++k++w++ XP_027348209.1 67 RGNFTQEEEERIIRMHKKLGNR-WSAIAAELP-GRTDNEIKNHWHTT 111 89******************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MVRTPSCDKS GLRKGTWTPE EDRKLIAYVT RYGCWNWRQL PRFAGLARCG KSCRLRWMNY 60 LRPNIKRGNF TQEEEERIIR MHKKLGNRWS AIAAELPGRT DNEIKNHWHT TLKKRFQENT 120 VTNEEVKASK TKDKESKKGK DTVSNNGVTV LQVNPPATSQ ISDNTGSLSP LSSSSDFSSI 180 SSDHSTAASN ENFMFEDDLG FLDEFTEPVS ENFWTDLYLD DISNNTTMPS DINGAFESTD 240 ATQILDSRTL SPHQSTSESM VVENEFGSFL DAYTEPTVDN FWTQPYVADM SHVPSELLVP 300 SVAESEYFST VYDADLWGQS NLYDEHLSLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	1e-58	MYB family protein