PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348210.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 225aa MW: 25944.7 Da PI: 5.1625

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348210.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.5e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++lvd+++++G +W++ ++ g+ R++k+c++rw++yl XP_027348210.1 14 KGTWTPEEDKKLVDYITRYGHWNWRLLPKFAGLARCGKSCRLRWLNYL 61 799***************99**********************97 PP
2	Myb_DNA-binding	59.5	7.2e-19	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T+eE+e ++++++ lG++ W++Ia+ m+ gRt++++k++w++ XP_027348210.1 67 RGNYTQEEEETIIKLHQDLGNR-WSAIAAQMP-GRTDNEIKNHWHTN 111 899*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MVRTPVCDKN GLKKGTWTPE EDKKLVDYIT RYGHWNWRLL PKFAGLARCG KSCRLRWLNY 60 LRPNLKRGNY TQEEEETIIK LHQDLGNRWS AIAAQMPGRT DNEIKNHWHT NLKKRSQEYS 120 VAETEVSKSK DQSPTQLNSD PFQSFQTTQE SSPLSQHSSS TTSGSTSNEN LSLEDEFAFL 180 DADAGLVSGN FWVEPYLLEL DISYDLSEPE HFCPVFDAEL WSYDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	6e-63	MYB family protein