PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348248.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 385aa MW: 42647.1 Da PI: 8.2687

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348248.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.3	7.1e-07	226	247	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C+ Cgk F+r nL+ H+r H XP_027348248.1 226 FCQVCGKGFKRDANLRMHMRAH 247 6*******************99 PP
2	zf-C2H2	10.8	0.0015	315	338	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H + + XP_027348248.1 315 YVCKRCNqKQFSVLSDLRTHEKHC 338 9*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MPKATSSFSN ASQELQMFPV TEYLVSPSTE ASSGSVSVSH SPSSLLFYLS LLKDKLSQLQ 60 NMVGVLMTPE HNLPESTSLA ISTMNSTIQE IIVAASSMGF ICQQMALGST TPGTTTSTNE 120 LHLQQQIDHD RLPHHHSNFD NNKGVLSNIN IGSDITIKGQ GFFSNTEAEA LAWFAESYNN 180 NNSSGNCNLR DDEANINSRG ELMSRGDEND IIELDAADLL AKYTHFCQVC GKGFKRDANL 240 RMHMRAHGDE YKTSAALSNP MKNKRSLLGE STGTKKYSCP HEGCRWNQKH ARFQPLKSMV 300 CMKNHYKRSH CPKMYVCKRC NQKQFSVLSD LRTHEKHCGD PKWQCSCGTT FSRKDKLMGH 360 VALFVGHTPA ISGKSEQQHI AGSSK

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MPKATSSFSN ASQELQMFPV TEYLVSPSTE ASSGSVSVSH SPSSLLFYLS LLKDKLSQLQ  60
NMVGVLMTPE HNLPESTSLA ISTMNSTIQE IIVAASSMGF ICQQMALGST TPGTTTSTNE  120
LHLQQQIDHD RLPHHHSNFD NNKGVLSNIN IGSDITIKGQ GFFSNTEAEA LAWFAESYNN  180
NNSSGNCNLR DDEANINSRG ELMSRGDEND IIELDAADLL AKYTHFCQVC GKGFKRDANL  240
RMHMRAHGDE YKTSAALSNP MKNKRSLLGE STGTKKYSCP HEGCRWNQKH ARFQPLKSMV  300
CMKNHYKRSH CPKMYVCKRC NQKQFSVLSD LRTHEKHCGD PKWQCSCGTT FSRKDKLMGH  360
VALFVGHTPA ISGKSEQQHI AGSSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	6e-96	C2H2 family protein