PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348338.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WOX

Protein Properties

Length: 375aa MW: 42017.1 Da PI: 7.9408

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348338.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55	1.4e-17	51	111	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p +ee++++ +l ++ +++V++WFqNr+ + k+ XP_027348338.1 51 KPRWNPKPEQIRILEAIFNSgMVNPPREEIRKIRLQLqeygQVGDANVFYWFQNRKSRSKH 111 89***************99***********************************995 PP
2	Wus_type_Homeobox	110.6	8.6e-36	50	112	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P++eei++i+ +L+eyG+++d+NVfyWFQNrk+R+++k XP_027348338.1 50 PKPRWNPKPEQIRILEAIFNSGMVNPPREEIRKIRLQLQEYGQVGDANVFYWFQNRKSRSKHK 112 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MASSNRHWPS MFKSKPCNPH HQWQHDINSS LMSRTPFSSG SYCDERSPEP KPRWNPKPEQ 60 IRILEAIFNS GMVNPPREEI RKIRLQLQEY GQVGDANVFY WFQNRKSRSK HKLRHLQNSK 120 NPNLEAQQNA ASLPQITAPS SSSSSSEKSS SKEMIYPTKG FSIGFSNVND VVPNSPTASV 180 NQNYIQSHLH NDTNLLPPTP EPFSFPLHHN GQGAMLNAMA TTQGFCFSEF NSMIQPQYQQ 240 NFGPCTSLLL NEMVNHGNTS KKDHDQDKAM KIMHQHPQLG FCLTSAPTTS DVPPISNIPI 300 NAIPSPITQL QGTGRSKCTV FINDIAFEVE VGPFNVRQAF GEEAVLIHSS GQPVLTDDWG 360 VTLQSLQHGA YYYLI

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MASSNRHWPS MFKSKPCNPH HQWQHDINSS LMSRTPFSSG SYCDERSPEP KPRWNPKPEQ  60
IRILEAIFNS GMVNPPREEI RKIRLQLQEY GQVGDANVFY WFQNRKSRSK HKLRHLQNSK  120
NPNLEAQQNA ASLPQITAPS SSSSSSEKSS SKEMIYPTKG FSIGFSNVND VVPNSPTASV  180
NQNYIQSHLH NDTNLLPPTP EPFSFPLHHN GQGAMLNAMA TTQGFCFSEF NSMIQPQYQQ  240
NFGPCTSLLL NEMVNHGNTS KKDHDQDKAM KIMHQHPQLG FCLTSAPTTS DVPPISNIPI  300
NAIPSPITQL QGTGRSKCTV FINDIAFEVE VGPFNVRQAF GEEAVLIHSS GQPVLTDDWG  360
VTLQSLQHGA YYYLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	1e-62	WOX family protein