PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027348389.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 241aa    MW: 28024.9 Da    PI: 8.1268
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027348389.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.11.1e-281059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien++nrqvtf+kRrng+lKK  ELS+LCdaev +i+fsstgkl+ey+s
  XP_027348389.1 10 RIENSTNRQVTFCKRRNGLLKKSRELSILCDAEVGLIVFSSTGKLHEYAS 59
                    8***********************************************86 PP
2K-box73.75.3e-25841711299
           K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     +  + +q+++a +k++++  +  +R+l+Ge+L++L ++eLq+Le+qL  slkk+R kK++ ++++i+el +k   ++++n +L++k++
  XP_027348389.1  84 SAIKFWQEKAASVKQQLQHFEDCHRQLMGEELSDLGINELQHLEKQLLMSLKKVRIKKDQTFTDKIKELHEKGSLIHQQNAELHNKID 171
                     56899********************************************************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MGRGKIAIRR IENSTNRQVT FCKRRNGLLK KSRELSILCD AEVGLIVFSS TGKLHEYAST  60
SMESVIERYD KQREDHYQPV DPASAIKFWQ EKAASVKQQL QHFEDCHRQL MGEELSDLGI  120
NELQHLEKQL LMSLKKVRIK KDQTFTDKIK ELHEKGSLIH QQNAELHNKI DLMHKEKTEL  180
QKVIEARRRE EEKTASNPAN THRYEYDIVE PLSLQLSQPQ PQYSEAPEEA MNLGHSLKLL  240
I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14210.13e-76MIKC_MADS family protein