PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027348390.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 251aa    MW: 28797.4 Da    PI: 9.4556
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027348390.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF81.74.7e-261059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ri++++ rqvtfskRr g+lKKA ELS+LCdaev +i+fs +gkly+y+s
  XP_027348390.1 10 RINDSTSRQVTFSKRRSGLLKKARELSILCDAEVGLIVFSCSGKLYDYAS 59
                    8***********************************************86 PP
2K-box80.34.7e-2781170998
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     + +++ + +q+e a L+++++ +q+  R+l+Ge+L+ L +keL +Le++Le slk iR+kK+e+l+++++el +ke    +en +L++k+
  XP_027348390.1  81 NPASEVKFWQRETASLRQQVHYMQECRRQLMGEELSGLGIKELGNLENRLEMSLKVIRKKKDEILTDEVKELHQKESLSLQENVELHRKI 170
                     567889**********************************************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MGRGKIVIQR INDSTSRQVT FSKRRSGLLK KARELSILCD AEVGLIVFSC SGKLYDYAST  60
SMKSVIERYH KAKEDHHQLI NPASEVKFWQ RETASLRQQV HYMQECRRQL MGEELSGLGI  120
KELGNLENRL EMSLKVIRKK KDEILTDEVK ELHQKESLSL QENVELHRKI SLICKENAEL  180
QKVLEANSTK EDIATSDPPY TMNHGYDLIA PISLQLRQPH PQHSESPAKA MKLGYYLKLM  240
LLIIQLGSIK I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.17e-89MIKC_MADS family protein