PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348506.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 341aa MW: 38665.4 Da PI: 6.6706

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348506.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.9	1.6e-12	165	212	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ ++f L l+P + +K +Ka++L A++Y+k+Lq XP_027348506.1 165 QDHIIAERKRREKLSQRFIALSALVPGL-----QKTDKASVLGDAIKYLKQLQ 212 5799*********************9.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence
MEIPSIRGLL DMEIMEDPTF LHQWHLNSID EPSLLPIAAA FGETLQHHAF TYPNSNPKTS 60 METALVDMDR PTKHLKNNSW NPSKTAQTSE TQFVSFPNLL SFVDSNHINP LGFLKPKDEM 120 VCPKTNNTIP PDMITQGTLC NQNCVFKTCQ ETKKIETRPK LSQPQDHIIA ERKRREKLSQ 180 RFIALSALVP GLQKTDKASV LGDAIKYLKQ LQDKVRALEE EQNMKKNMES VVIVKKSQLS 240 NDAENSFSES DGLFDEALPE IEARFCERNV LIRVHCEKSK GVVENIIHAI EKVHLKVTNS 300 SAMTFGRCAL DITIIAQMDM EFCMGVQDLV RNLRSTFTSF M

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	171	176	ERKRRE
2	172	177	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	5e-62	bHLH family protein