PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027348575.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

TCP

Protein Properties

Length: 323aa MW: 34604.6 Da PI: 8.6173

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027348575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	129.7	2.8e-40	40	156	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++ +++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +s++s+ ss+ XP_027348575.1 40 PPKRTSMKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSAGSSLSSPshffnrh 134 789******************************************************************99986667777666555554455555 PP TCP 89 .....................k 89 + XP_027348575.1 135 vtsnyftnnnnnpfstppppfS 156 5555554333333333333330 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MEGDPHHSQN GIHRPNFPLQ LLEKNDERQI EASAAPKKPP PKRTSMKDRH TKVDGRGRRI 60 RMPAACAARV FQLTRELGHK SDGETIEWLL QQAEPAVIAA TGTGTIPANF TSLNISLRSA 120 GSSLSSPSHF FNRHVTSNYF TNNNNNPFST PPPPFSSRNN LVLQDSRRAL FPDANCFFNF 180 DSVGNGNAVK RRRREGEEEV TASPSHLGSC LSQSSTGSIP ASNASVPASF WMMSGCDSIC 240 AIPSVGNSGL YKGTVSNSNS SAGGIHFMNF ASPMSLLPGQ QLGSGGAMLP ESNLGIIASL 300 NGYRPIPANE EHCGDSKNDV ASV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	2e-49	TCP family protein