PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027348665.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 242aa    MW: 28021.3 Da    PI: 9.3686
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027348665.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF82.72.3e-264393151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n s rqvtfskRr+g++KKA+ELS+LCda++a+i+fs t kl+ey+s
  XP_027348665.1 43 KKIDNISSRQVTFSKRRKGLFKKAQELSTLCDADIALIVFSATSKLFEYAS 93
                    68***********************************************86 PP
2K-box54.35.6e-191242021896
           K-box  18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                     +   + L++++e   re+R++ GedL+ L+l+eLq+Le+ L+++l++i + K+e ++++i++l++ke el een++L++
  XP_027348665.1 124 SDSNDMLRQKVEDKNRELRQMNGEDLQGLTLQELQKLEELLKRGLTNISKVKDEKIMQEISTLKRKEVELTEENQKLKQ 202
                     455577999********************************************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MLNMLDLLYI LSGESLSFIF FLDARVWVFL MYREMTRKRI QIKKIDNISS RQVTFSKRRK  60
GLFKKAQELS TLCDADIALI VFSATSKLFE YASSSMHQVI ERRDRHSASH RLDRPAIDQL  120
QLESDSNDML RQKVEDKNRE LRQMNGEDLQ GLTLQELQKL EELLKRGLTN ISKVKDEKIM  180
QEISTLKRKE VELTEENQKL KQVPSLTHVQ RQSSESIIST SSYLPEDGGG DTCLKLGLPL  240
LK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-45MIKC_MADS family protein