PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027348758.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 841aa    MW: 92159.1 Da    PI: 6.0791
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027348758.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.42.5e-182583357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_027348758.1 25 KYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 83
                    56789****************************************************97 PP
2START160.21.6e-501633702204
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +ae++++e+++ka+ ++  Wv+++ +++g++++ +f+ s+++sg a+ra+g+v  +++   +e+l+d++ W +++++ e+      g  g+++l 
  XP_027348758.1 163 IAEDTLTEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPT-KIAEILKDRPSWFRDCRSLEVFTMFPAGngGTIELV 256
                     78999*****************************************************.7777777777***********999999999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++++a+++l+p Rdf+++Ry+ +l+ g++v++++S++     p+    +++vRae+lpSg+li+p+++g+s +++v+h +l++++++++lr+l+
  XP_027348758.1 257 YTQTYAPTTLAPaRDFWTLRYTTSLENGSLVVCERSLSGSGTGPNpaaAAQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLY 351
                     *************************************987777777899********************************************** PP

                     HHHHHHHHHHHHHHTXXXX CS
           START 186 ksglaegaktwvatlqrqc 204
                     +s+ + ++k++ a+l++ +
  XP_027348758.1 352 ESSKVIAQKMTIAALRYIR 370
                     **************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 841 aa     Download sequence    
MAMAVAQHRE SSSSGSIEKH LDSGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECP  60
ILSNIEPKQI KVWFQNRRCR EKQRKEASRL QTVNRKLTAM NKLLMEENDR LQKQVSQLVC  120
ENGYMRQQLH TVTATTDASC DSVVTTPQQS MRDANNPAGL LSIAEDTLTE FLSKATGTAV  180
DWVQMPGMKP GPDSVGIFAI SQSCSGVAAR ACGLVSLEPT KIAEILKDRP SWFRDCRSLE  240
VFTMFPAGNG GTIELVYTQT YAPTTLAPAR DFWTLRYTTS LENGSLVVCE RSLSGSGTGP  300
NPAAAAQFVR AEMLPSGYLI RPCEGGGSII HIVDHLNLEA WSVPEVLRPL YESSKVIAQK  360
MTIAALRYIR QIAQETSGEV VYGLGRQPAV LRTFSQRLSR GFNDAVNGFN DDGWTVLNCD  420
GAEDVIIAVN STKNLSGTSN PASSLTFLGG ILCAKASMLL QNVPPAVLVR FLREHRSEWA  480
DFNVDAYSAA SLKAGTYAYP GMRPTRFTGS QIIMPLGHTI EHEEMLEVIR LEGHSLAQED  540
AFVSRDIHLL QICSGIDENA VGACSELIFA PIDEMFPDDA PLVPSGFRII PLDSKPGDKK  600
DTMTTNRTLD LTSGFEVGPA TANGADASSS HNTRSVLTIA FQFPFDSSLQ DNVAVMARQY  660
VRSVISSVQR VAMAISPSGI NTPVGAKLSP GSPEAVTLAH WICQSYSYYL GSDLLSSDSL  720
VGDMMLKHLW HHQDAILCCS LKSLPVFIFA NQAGLDMLET TLVALQDITL DKIFDESGRK  780
TLFADFAKLM QQGFAYLPAG ICMSTMGRHV SYDQAIAWKV LTGEDNTVHC LAFSFINWSF  840
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein